---
date: 2017-07-24T00:11:02+01:00
title: Featured Articles
weight: 30
---



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<div id="section" class="section level2">
<h2><i class="fa fa-calendar"></i> 2017</h2>
<p><a href="https://doi.org/10.1038/nature24678">Promoter-bound METTL3 maintains myeloid leukaemia by m6A-dependent translation control</a>. <strong><em>Nature</em></strong>. 2017.</p>
<p><a href="https://www.nature.com/articles/nature24487">Regeneration of the entire human epidermis using transgenic stem cells</a>. <strong><em>Nature</em></strong>. 2017.</p>
<p><a href="https://doi.org/10.1093/neuonc/nox186">Global DNA methylation analysis reveals miR-214-3p contributes to cisplatin resistance in pediatric intracranial nongerminomatous malignant germ cell tumors</a>. <strong><em>Neuro-Oncology</em></strong>. 2017.</p>
<p><a href="https://doi.org/10.1093/nar/gkx860">Identification of the direct regulon of NtcA during early acclimation to nitrogen starvation in the cyanobacterium <em>Synechocystis</em> sp. PCC 6803</a>. <strong><em>Nucleic Acids Research</em></strong>. 2017.</p>
<p><a href="https://www.nature.com/articles/s41467-017-00702-5">ZNF516 suppresses EGFR by targeting the CtBP/LSD1/CoREST complex to chromatin</a>. <strong><em>Nature Communications</em></strong>. 2017, 8:691.</p>
<p><a href="http://www.sciencedirect.com/science/article/pii/S1074761317303680">An NF-κB Transcription-Factor-Dependent Lineage-Specific Transcriptional Program Promotes Regulatory T Cell Identity and Function</a>. <strong><em>Immunity</em></strong>. 2017, 47(3):450-465.</p>
<p><a href="https://doi.org/10.1038/ncomms16034">BRG1-SWI/SNF-dependent regulation of the Wt1 transcriptional landscape mediates epicardial activity during heart development and disease</a>. <strong><em>Nature Communications</em></strong>. 2017, 8:16034.</p>
<p><a href="http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3844.html">Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons</a>. <strong><em>Nature Genetics</em></strong>. 2017, 49:925-934.</p>
<p><a href="http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3868.html">Lineage-specific functions of TET1 in the postimplantation mouse embryo</a>. <strong><em>Nature Genetics</em></strong>. 2017, 49:1061-1072.</p>
<p><a href="http://www.nature.com/nsmb/journal/vaop/ncurrent/full/nsmb.3392.html">A cytosolic Ezh1 isoform modulates a PRC2–Ezh1 epigenetic adaptive response in postmitotic cells</a>. <strong><em>Nature Structural &amp; Molecular Biology</em></strong>. 2017, 24:444-452.</p>
<p><a href="http://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1197-z">H2A monoubiquitination in Arabidopsis thaliana is generally independent of LHP1 and PRC2 activity</a>. <strong><em>Genome Biology</em></strong>. 2017, 18:69</p>
<p><a href="https://elifesciences.org/content/6/e18825">Human Nup98 regulates the localization and activity of DExH/D-box helicase DHX9</a>. <strong><em>eLife</em></strong>. 2017, 6:e18825</p>
<p><a href="http://immunology.sciencemag.org/content/2/9/eaag3160">Maintenance of macrophage transcriptional programs and intestinal homeostasis by epigenetic reader SP140</a>. <strong><em>Science Immunology</em></strong>. 2017, 2(9):eaag3160</p>
<p><a href="http://www.nature.com/ncb/journal/vaop/ncurrent/full/ncb3471.html">Identification of quiescent and spatially restricted mammary stem cells that are hormone responsive</a>. <strong><em>Nature Cell Biology</em></strong>. 2017, 19:164–176</p>
<p><a href="http://dx.doi.org/10.1093/nar/gkw1179">Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes</a>. <strong><em>Necleic Acids Research</em></strong>. 2017, 45(6):e41</p>
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<div id="section-1" class="section level2">
<h2><i class="fa fa-calendar"></i> 2016</h2>
<p><a href="http://jem.rupress.org/content/early/2016/09/14/jem.20160185.full">Dpy30 is critical for maintaining the identity and function of adult hematopoietic stem cells</a>. <strong><em>The Journal of Experimental Medicine</em></strong>. 2016, 213(11):2349-2364</p>
<p><a href="https://elifesciences.org/content/5/e17361">Satb2 determines miRNA expression and long-term memory in the adult central nervous system</a>. <strong><em>eLife</em></strong>. 2016, 5:e17361</p>
<p><a href="http://www.nature.com/nature/journal/vaop/ncurrent/full/nature20568.html">m<sup>6</sup>A modulates neuronal functions and sex determination in Drosophila</a>. <strong><em>Nature</em></strong>. 2016, 540:242–247.</p>
<p><a href="http://www.nature.com/ncb/journal/vaop/ncurrent/full/ncb3424.html">Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a</a>. <strong><em>Nature Cell Biology</em></strong>. 2016, 18(11):1127–1138</p>
<p><a href="http://dx.doi.org/10.1002/bit.25990">Comprehensive genome and epigenome characterization of CHO cells in response to evolutionary pressures and over time</a>. <strong>Biotechnology and Bioengineering</strong>. 2016, 113(10):2241-2253.</p>
<p><a href="http://dx.doi.org/10.1093/bib/bbv110">A comprehensive comparison of tools for differential ChIP-seq analysis</a>. <strong><em>Briefings in Bioinformatics</em></strong>. 2016, 17(6): 953-966.</p>
<p><a href="http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004751"><em>metagene</em> Profiles Analyses Reveal Regulatory Element’s Factor-Specific Recruitment Patterns</a>. <strong>PLoS Comput Biol</strong>. 2016, 12(8): e1004751.</p>
<p><img src="https://guangchuangyu.github.io/featured_img/ChIPseeker/journal.pcbi.1004751.g003.PNG" /></p>
<p><a href="http://dx.doi.org/10.1073/pnas.1609709113">Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin</a>. <strong>PNAS</strong> Aug, 2016</p>
<p><img src="https://guangchuangyu.github.io/featured_img/ChIPseeker/F9.large.jpg" /></p>
<p><a href="http://f1000research.com/articles/5-1542/v1">TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages</a>. <strong>F1000Research</strong>. 2016, 5:1542.</p>
<p><img src="https://guangchuangyu.github.io/featured_img/ChIPseeker/heatmap2016.gif" /></p>
<p><a href="http://dx.doi.org/10.1074/jbc.M116.721217">Cistrome-based Cooperation between Airway Epithelial Glucocorticoid Receptor and NF-κB Orchestrates Anti-inflammatory Effects</a>. <strong>The Journal of Biological Chemistry</strong> 2016, 291:12673-12687.</p>
<p><a href="http://dx.doi.org/10.1016/j.cmet.2015.11.004">Obesity and Bariatric Surgery Drive Epigenetic Variation of Spermatozoa in Humans</a>. <strong>Cell Metabolism</strong> 2016, 23(2):369-378.</p>
<p><a href="http://dx.doi.org/10.1039/C5MB00663E">ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization</a>. <strong><em>Molecular BioSystems</em></strong>. 2016, 12(2):477-479.</p>
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<div id="section-2" class="section level2">
<h2><i class="fa fa-calendar"></i> 2015</h2>
<p><a href="http://dx.doi.org/10.1101/gad.268821.115">Elf5-centered transcription factor hub controls trophoblast stem cell self-renewal and differentiation through stoichiometry-sensitive shifts in target gene networks</a>. <strong>Genes &amp; Development</strong> 2015, 29:2435-2448.</p>
<p><a href="http://dx.doi.org/10.1074/jbc.M115.668558">Response Element Composition Governs Correlations between Binding Site Affinity and Transcription in Glucocorticoid Receptor Feed-forward Loops</a>. <strong>The Journal of Biological Chemistry</strong> 2015, 290:19756-19769.</p>
<p><a href="http://dx.doi.org/10.1186/s12864-015-1495-3">Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila</a>. <strong>BMC Genomics</strong> 2015, 16:292.</p>
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